Available Nucleotide Alphabet

Deoxynucleotides
Description 'DNA' Code 'Therapeutic' Code
Deoxy-Adenosine A dA
Deoxy-Cytidine C dC
Deoxy-Guanosine G dG
Deoxy-Thimidine T dT
Deoxy-A/T W dW
Deoxy-C/G S dS
Deoxy-A/C M dM
Deoxy-G/T K dK
Deoxy-A/G R dR
Deoxy-C/T Y dY
Deoxy-C/G/T B dB
Deoxy-A/G/T D dD
Deoxy-A/C/T H dH
Deoxy-A/C/G V dV
Deoxy-A/C/G/T N dN
5-Me-Deoxy-Cytidine [dCm] dCm
Deoxy-Uridine [dU] dU
2'-MOE Ribonucleotides
Description 'DNA' Code 'Therapeutic' Code
2'-MOE-Adenosine [moeA] moeA
2'-MOE-5-Me-Cytidine [moeCm] moeCm
2'-MOE-Guanosine [moeG] moeG
2'-MOE-Thymidine [moeT] moeT
Ribonucleotides
Description 'DNA' Code 'Therapeutic' Code
Ribo-Adenosine [rA] rA
Ribo-Cytidine [rC] rC
Ribo-Guanosine [rG] rG
Ribo-Uridine [rU] rU
2'-Fluoro Deoxynucleotides
Description 'DNA' Code 'Therapeutic' Code
2'-Fluoro-Adenosine [fA] fA
2'-Fluoro-Cytidine [fC] fC
2'-Fluoro-Guanosine [fG] fG
2'-Fluoro-Uridine [fU] fU
2'-OMe Ribonucleotides
Description 'DNA' Code 'Therapeutic' Code
2'-OMe-Adenosine [mA] mA
2'-OMe-Cytidine [mC] mC
2'-OMe-Guanosine [mG] mG
2'-OMe-Uridine [mU] mU
LNA Nucleotides
Description 'DNA' Code 'Therapeutic' Code
LNA Adenosine [+A] +A
LNA 5-Me-Cytidine [+Cm] +Cm
LNA Guanosine [+G] +G
LNA Thymidine [+T] +T

Available Modifications

Description 'DNA' Code 'Therapeutic' Code
Fluorescein [FAM] FAM
Tetrachlorofluorescein [TET] TET
Hexachlorofluorescein [HEX] HEX
Dichloro-dimethoxyfluorescein [JOE] JOE
Phenyl-trichlorofluorescein [VIC] VIC
Tetramethylrhodamine, ACH linker [TMR-ACH] TMR-ACH
Rhodamine 6G [R6G] R6G
Rhodamine 6G, ACH linker [R6G-ACH] R6G-ACH
Rhodamine X (ROX), via 'click' [ROX-CLK] ROX-CLK
Texas Red, via 'click' [TR-CLK] TR-CLK
Alexa Fluor 594 (AF594), via 'click' [AF594-CLK] AF594-CLK
Cyanine3, ACH linker [CY3-ACH] CY3-ACH
Cyanine5, via 'click' [CY5-CLK] CY5-CLK
Black Hole Quencher 1 [BHQ1] BHQ1
Black Hole Quencher 2 [BHQ2] BHQ2
Eclipse Quencher [ECLIPSE] ECLIPSE
Minor Groove Binder Eclipse Quencher [MGB-ECLIPSE] MGB-ECLIPSE
Minor Groove Binder [MGB] MGB
Description 'DNA' Code 'Therapeutic' Code
Phosphate (5' or/and 3') [po] po
Phosphorothioate (internal) * *
Alkyne, ACH linker [ALKYNE] ALKYNE
Cholesterol, prolinol linker [CHOL-PRO] CHOL-PRO
Monomeric GalNAc, prolinol linker [GALNAC-PRO] GALNAC-PRO
Trimeric GalNAc, prolinol linker (Alnylam) [GALNAC3-ALN] GALNAC3-ALN
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